Algorithms¶
Default algorithm is a random search based on the probability distribution given to a search parameter’s definition.
Selecting and Configuring¶
In a Oríon configuration YAML, define:
experiment:
algorithms:
gradient_descent:
learning_rate: 0.1
In this particular example, the name of the algorithm extension class to be
imported and instantiated is Gradient_Descent
, so the lower-case identifier
corresponds to it.
All algorithms have default arguments that should work reasonably well in general.
To tune the algorithm for a specific problem, you can set those arguments in the
yaml file as shown above with learning_rate
.
Included Algorithms¶
Random Search¶
Random search is the most simple algorithm. It samples from given priors. That’s it.
Configuration¶
experiment:
algorithms:
random:
seed: null
seed
Seed for the random number generator used to sample new trials. Default is None
.
Hyperband¶
Hyperband extends the SuccessiveHalving algorithm by providing a way to exploit a
fixed budget with different number of configurations for SuccessiveHalving
algorithm to
evaluate. Each run of SuccessiveHalving
will be defined as a bracket
in Hyperband.
Hyperband requires two inputs (1) R
, the maximum amount of resource that can be allocated
to a single configuration, and (2) eta
, an input that controls the proportion of
configurations discarded in each round of SuccessiveHalving.
To use Hyperband in Oríon, you must specify one parameter with fidelity(low, high, base)
as the prior, low
will be ignored, high
will be taken as the maximum resource R
and base
will be taken as the reduction factor eta
.
Number of epochs usually can be used as the resource but the algorithm is generic and can be
applied to any multi-fidelity setting. That is, you can use training time, specifying the
fidelity with --epochs~fidelity(low=1, high=81, base=3)
(assuming your script takes this argument in commandline),
but you could also use other fidelity
such as dataset size --dataset-size~fidelity(low=500, high=50000)
(assuming your script takes this argument and adapt dataset size accordingly).
Note
Current implementation does not support more than one fidelity dimension.
Configuration¶
experiment:
algorithms:
hyperband:
seed: null
repetitions: 1
strategy: StubParallelStrategy
Note
Notice the additional strategy
in configuration which is not mandatory for most other
algorithms. See StubParallelStrategy for more information.
seed
Seed for the random number generator used to sample new trials. Default is None
.
repetitions
Number of executions for Hyperband. A single execution of Hyperband takes a finite
budget of (log(R)/log(eta) + 1) * (log(R)/log(eta) + 1) * R
, and repetitions
allows you
to run multiple executions of Hyperband. Default is numpy.inf
which means to run Hyperband
until no new trials can be suggested.
ASHA¶
Asynchronous Successive Halving Algorithm, the asynchronous version of Hyperband, can be roughly interpreted as a sophisticated random search that leverages partial information of the trial execution to concentrate resources on the most promising ones.
The main idea of the algorithm is the following. Given a fidelity dimension, such as the number of epochs to train or the size of the dataset, ASHA samples trials with low-fidelity and promotes the most promising ones to the next fidelity level. This makes it possible to only execute one trial with full fidelity, leading to very optimal resource usage.
The most common way of using ASHA is to reduce the number of epochs,
but the algorithm is generic and can be applied to any multi-fidelity setting.
That is, you can use training time, specifying the fidelity with
--epochs~fidelity(low=1, high=100)
(assuming your script takes this argument in commandline),
but you could also use other fidelity
such as dataset size --dataset-size~fidelity(low=500, high=50000)
(assuming your script takes this argument and
adapt dataset size accordingly). The placeholder fidelity(low, high)
is a special prior for
multi-fidelity algorithms.
Note
Current implementation does not support more than one fidelity dimension.
Configuration¶
experiment:
algorithms:
asha:
seed: null
num_rungs: null
num_brackets: 1
strategy: StubParallelStrategy
Note
Notice the additional strategy
in configuration which is not mandatory for most other
algorithms. See StubParallelStrategy for more information.
seed
Seed for the random number generator used to sample new trials. Default is None
.
num_rungs
Number of rungs for the largest bracket. If not defined, it will be equal to (base + 1)
of the
fidelity dimension. In the original paper,
num_rungs == log(fidelity.high/fidelity.low) / log(fidelity.base) + 1
.
num_brackets
Using a grace period that is too small may bias ASHA too strongly towards fast converging trials that do not lead to best results at convergence (stragglers). To overcome this, you can increase the number of brackets, which increases the amount of resources required for optimisation but decreases the bias towards stragglers. Default is 1.
TPE¶
Tree-structured Parzen Estimator (TPE) algorithm is one of Sequential Model-Based Global Optimization (SMBO) algorithms, which will build models to propose new points based on the historical observed trials.
Instead of modeling p(y|x) like other SMBO algorithms, TPE models p(x|y) and p(y), and p(x|y) is modeled by transforming that generative process, replacing the distributions of the configuration prior with non-parametric densities.
The TPE defines p(x|y) using two such densities l(x) and g(x) where l(x) is distribution of good points and g(x) is the distribution of bad points. Good and bad points are split from observed points so far with a parameter gamma which defines the ratio of good points. New point candidates will be sampled with l(x) and Expected Improvement (EI) optimization scheme will be used to find the most promising point among the candidates.
Note
Current implementation only supports uniform, loguniform, uniform discrete and choices as prior. As for choices prior, the probabilities if any given will be ignored.
Configuration¶
experiment:
algorithms:
tpe:
seed: null
n_initial_points: 20
n_ei_candidates: 25
gamma: 0.25
equal_weight: False
prior_weight: 1.0
full_weight_num: 25
seed
Seed to sample initial points and candidates points. Default is None
.
n_initial_points
Number of initial points randomly sampled. Default is 20
.
n_ei_candidates
Number of candidates points sampled for ei compute. Default is 24
.
gamma
Ratio to split the observed trials into good and bad distributions. Default is 0.25
.
equal_weight
True to set equal weights for observed points. Default is False
.
prior_weight
The weight given to the prior point of the input space. Default is 1.0
.
full_weight_num
The number of the most recent trials which get the full weight where the others will be
applied with a linear ramp from 0 to 1.0. It will only take effect if equal_weight
is False
. Default is 25
.
Evolution-ES¶
Evolution-ES, the evolution algorithm with early stop version. Here is an implementation of Evolution-ES. In the evolution algorithm, we follow the tournament selection algorithm as Large-Scale-Evolution. Tournament selection evolutionary hyper-parameter search is conducted by first defining a gene encoding that describes a hyper-parameter combination, and then creating the initial population by randomly sampling from the space of gene encodings to create individuals, which are trained and assigned fitnesses. The population is then repeatedly sampled from to produce groups, and the parent is selected by the individual with the highest fitness. Selected parents have their gene encodings mutated to produce child models. Individual in the group with the lowest fitness is killed, while the newly evaluated child model is added to the population, taking the killed individual’s place. This process is repeated and results in a population with high fitness individuals can represent the good hyper-parameter combination. Evolution-ES also formulated a method to dynamically allocate resources to more promising individual according to their fitness, which is referred to as Progressive Dynamic Hurdles (PDH), allows individuals that are consistently performing well to train for more steps. It can be roughly interpreted as a sophisticated random search that leverages partial information of the trial execution to concentrate resources on the most promising ones.
The implementation follows the process and use way of Hyperband.
Additionally, The fidelity base in Evolution-ES can be
extended to support fidelity(low, high, base=1)
,
which is the same as linspace(low, high)
.
Configuration¶
experiment:
algorithms:
EvolutionES:
seed: null
repetitions: 1
nums_population: 20
mutate:
function: orion.algo.mutate_functions.default_mutate
multiply_factor: 3.0
add_factor: 1
strategy: StubParallelStrategy
seed
Seed for the random number generator used to sample new trials. Default is None
.
repetitions
Number of executions for Hyperband. A single execution of Hyperband takes a finite
budget of (log(R)/log(eta) + 1) * (log(R)/log(eta) + 1) * R
, and repetitions
allows you
to run multiple executions of Hyperband. Default is numpy.inf
which means to run Hyperband
until no new trials can be suggested.
nums_population
Number of population for EvolutionES. Larger number of population often gets better performance but causes more computation. So there is a trade-off according to the search space and required budget of your problems.
mutate
In the mutate part, one can define the customized mutate function with its mutate factors, such as multiply factor (times/divides by a multiply factor) and add factor (add/subtract by a multiply factor). We support the default mutate function.
Algorithm Plugins¶
Bayesian Optimizer¶
orion.algo.skopt
provides a wrapper for Bayesian optimizer using Gaussian process implemented
in scikit optimize.
Installation¶
pip install orion.algo.skopt
Configuration¶
experiment:
algorithms:
BayesianOptimizer:
seed: null
n_initial_points: 10
acq_func: gp_hedge
alpha: 1.0e-10
n_restarts_optimizer: 0
noise: "gaussian"
normalize_y: False
seed
n_initial_points
Number of evaluations of func
with initialization points
before approximating it with base_estimator
. Points provided as
x0
count as initialization points. If len(x0) < n_initial_points
additional points are sampled at random.
acq_func
Function to minimize over the posterior distribution. Can be:
["LCB", "EI", "PI", "gp_hedge", "EIps", "PIps"]
. Check skopt
docs for details.
alpha
Value added to the diagonal of the kernel matrix during fitting. Larger values correspond to increased noise level in the observations and reduce potential numerical issues during fitting. If an array is passed, it must have the same number of entries as the data used for fitting and is used as datapoint-dependent noise level. Note that this is equivalent to adding a WhiteKernel with c=alpha. Allowing to specify the noise level directly as a parameter is mainly for convenience and for consistency with Ridge.
n_restarts_optimizer
The number of restarts of the optimizer for finding the kernel’s parameters which maximize the log-marginal likelihood. The first run of the optimizer is performed from the kernel’s initial parameters, the remaining ones (if any) from thetas sampled log-uniform randomly from the space of allowed theta-values. If greater than 0, all bounds must be finite. Note that n_restarts_optimizer == 0 implies that one run is performed.
noise
If set to “gaussian”, then it is assumed that y is a noisy estimate of f(x) where the noise is gaussian.
normalize_y
Whether the target values y are normalized, i.e., the mean of the observed target values become zero. This parameter should be set to True if the target values’ mean is expected to differ considerable from zero. When enabled, the normalization effectively modifies the GP’s prior based on the data, which contradicts the likelihood principle; normalization is thus disabled per default.
Parallel Strategies¶
A parallel strategy is a method to improve parallel optimization for sequential algorithms. Such algorithms can only observe trials that are completed and have a corresponding objective. To get around this, parallel strategies produces lies, noncompleted trials with fake objectives, which are then passed to a temporary copy of the algorithm that will suggest a new point. The temporary algorithm is then discarded. The original algorithm never obverses lies, and the temporary copy always observes lies that are based on most up-to-date data. The strategies will differ in how they assign objectives to the lies.
By default, the strategy used is MaxParallelStrategy
NoParallelStrategy¶
Does not return any lie. This is useful to benchmark parallel strategies and measure how they can help compared to no strategy.
StubParallelStrategy¶
Assign to lies an objective of None
so that
non-completed trials are observed and identifiable by algorithms
that can leverage parallel optimization.
The value of the objective is customizable with stub_value
.
experiment:
strategy:
StubParallelStrategy:
stub_value: 'custom value'
MaxParallelStrategy¶
Assigns to lies the best objective observed so far.
The default value assigned to objective when less than 1 trial
is completed is configurable with default_result
. It
is float('inf')
by default.
experiment:
strategy:
MaxParallelStrategy:
default_result: 10000
MeanParallelStrategy¶
Assigns to lies the mean of all objectives observed so far.
The default value assigned to objective when less than 2 trials
are completed is configurable with default_result
. It
is float('inf')
by default.
experiment:
strategy:
MeanParallelStrategy:
default_result: 0.5